MICROBIOLOGIA E BIOTECNOLOGIE PER LA SOSTENIBILITA' AMBIENTALE

Academic Year 2026/2027 - Teacher: DARIA NICOLOSI

Expected Learning Outcomes

The course aims to provide integrated knowledge of microbiology and microbial ecology applied to the study of natural and contaminated environments, with particular emphasis on the role of microorganisms in environmental processes and on their biotechnological applications for bioremediation and the sustainable management of environmental matrices. The course also aims to illustrate the fundamental concepts required to understand the relationships between environment and health, with particular reference to the effects of climate change on disease distribution, the health risks associated with water contamination, and the consequences of air pollution on human health.

Knowledge and understanding

By the end of the course, students will be able to describe and explain the structure, physiology, metabolism, and growth of the main microorganisms of environmental interest and to understand their interactions within microbial communities. They will also be able to describe the microbiological characteristics of the main environmental compartments and extreme environments, as well as the role of microorganisms in biogeochemical cycles. Students will acquire knowledge of the mechanisms underlying microbial adaptation to contaminated environments, the degradation and transformation of organic and inorganic pollutants, and the microbiological and biotechnological principles of bioremediation, biostimulation, bioaugmentation, mycoremediation, and phytoremediation. They will also understand the role of microbial processes in wastewater treatment, organic waste management, composting, and the biodeterioration and restoration of cultural heritage. Students will also be able to explain the main relationships between environment, climate, and health, including how climate change may alter the geographical and seasonal distribution of vectors and the diseases they transmit. Finally, they will be able to describe the main health risks associated with microbiological contamination of water, the major infections transmitted via the fecal–oral route, infections associated with water systems and aerosols, the most harmful air pollutants, and their effects on health.

Applying knowledge and understanding

By the end of the course, students will be able to use the knowledge acquired to interpret the microbiological, environmental, and health risks addressed in the course; relate the characteristics of natural and contaminated environments to the composition and activities of microbial communities; distinguish the main processes involved in the degradation and transformation of pollutants; compare different bioremediation strategies and identify their principal fields of application; and interpret the role of microorganisms in water treatment, waste treatment, and composting. They will also be able to relate climate change to changes in vector distribution and to the risk of acquiring vector-borne diseases, recognize the main routes of transmission of infections associated with water contamination, and relate the major forms of air pollution to their effects on health.

Making judgements

By the end of the course, students will be able to critically analyse the interactions among microorganisms, the environment, and human activities, assessing the role of microbial communities in environmental contamination, transformation, and remediation processes. They will also be able to compare different microbiological and biotechnological strategies for bioremediation and environmental management, evaluating their principles, potential, and limitations in relation to the characteristics of contaminated environmental matrices. Finally, students will be able to integrate microbiological, environmental, and health-related knowledge in order to critically interpret the relationships between climate change and its effects on health.

Communication skills

By the end of the course, students will be able to clearly, coherently, and scientifically present the principles of microbiology, environmental biotechnology, and the relationships between environment and health, using the specific terminology of the discipline appropriately. They will also be able to establish connections among the different topics covered in the course, clearly illustrating the relationships among microorganisms, environmental contamination, bioremediation strategies, climate change, water and air quality, and health effects.

Learning skills

Students will be able to independently explore the topics covered during the course through the critical consultation of textbooks, teaching materials, and relevant scientific sources. Artificial Intelligence (AI) may also be used as a study-support tool, in compliance with current regulations, including those concerning copyright and the use of intellectual works, as described in Section 5.1 of the guidelines (https://www.unict.it/it/ateneo/cidia-centro-l%E2%80%99informatica-la-digitalizzazione-e-l%E2%80%99intelligenza-artificiale).

According to Article 12 of the University Academic Regulations (RDA) concerning University Educational Credits (CFU), the standard overall student workload corresponding to one credit is 25 hours. This may include 7 hours of lectures or equivalent teaching activities, with the remaining hours devoted to individual study; or at least 12 and no more than 15 hours of classroom exercises or equivalent supervised activities (laboratory sessions), with the remaining hours devoted to individual study and personal revision.

Course Structure

The course is delivered primarily through lectures, which fall within the framework of Direct Instruction (Didattica Erogativa, DE), aimed at fostering the acquisition and understanding of the theoretical and applied contents of microbiology, microbial ecology, and biotechnology for environmental sustainability, as well as the main relationships between environment and health. During the lectures, instructors use presentations, videos, and explanatory audiovisual materials selected to facilitate understanding of the course topics.

Teaching activities are organized to promote the progressive acquisition of the knowledge required to achieve the expected learning outcomes, particularly with regard to knowledge and understanding, applying knowledge and understanding, making judgements, and communication skills.

If the course is delivered in blended or remote mode, appropriate adjustments may be made to the above in order to ensure consistency with the programme set out in this syllabus.

Required Prerequisites

Basic knowledge of general microbiology is considered important for understanding the course content, with particular emphasis on the structure, physiology, metabolism, and growth of microorganisms, together with some fundamental concepts of biochemistry, including the structure and function of the main biomolecules, enzyme activity, energy metabolism, and oxidation-reduction reactions.

Attendance of Lessons

Attendance is mandatory, as required by the academic regulations of the Degree Programme. Absences are permitted for no more than 30% of the total teaching hours, considering all modes of course delivery (https://www.dsf.unict.it/it/corsi/l-29_sfa/regolamento-didattico).

Detailed Course Content

Fundamentals of Microbiology and Microbial Ecology

Structure and organization of prokaryotic and eukaryotic cells: bacteria, fungi, algae, and protozoa of environmental interest.

Basic concepts of virology.

Classification, nutrition, metabolism, and growth of microorganisms of environmental interest.

Biological associations and interactions among microorganisms.

Microbial biofilms: formation, structure, properties, and environmental relevance.

Microbiology of the main environmental compartments: soil, water, and atmosphere; microbiology of extreme environments.

Biogeochemical cycles of the elements and the role of microorganisms.


Microbiology of Contaminated Environments and Biotechnologies for Bioremediation

Microbial adaptation to contaminated environments.

Microbial degradation and transformation of organic pollutants.

Microbial transformation of inorganic pollutants and interactions with metals.

Microbiological principles of in situ and ex situ bioremediation.

Biostimulation and bioaugmentation.

Mycoremediation and phytoremediation.

Microbial biotechnologies for the decontamination of soils, water, and sediments.


Microbiological Processes Applied to Environmental Management

Microbiology of water and wastewater.

Microbiological indicators of water contamination.

Microbiological principles of wastewater treatment plants and biological processes for wastewater treatment.

Natural wastewater treatment systems and phytoremediation.

Solid waste and biological treatment of organic waste.

Microbiological principles of composting.

Microbial biodeterioration of artistic artifacts and biotechnological applications for the conservation and restoration of cultural heritage.


Environment–Health Relationship

Relationship between environment, climate, and health.

Effects of climate change on the geographical distribution of arthropod vectors and the pathogens they transmit.

Influence of temperature, precipitation, humidity, and ecosystem changes on vector survival, reproduction, and vector competence.

Latitudinal and altitudinal expansion of vectors and changes in the seasonal duration of transmission.

Globalization, human mobility, and the introduction of vectors and pathogens into new geographical areas.

Climate change and the risk of emergence or re-emergence of vector-borne diseases in the Mediterranean region.

Environmental and epidemiological surveillance of vector-borne diseases.


Water–Health Relationship

Microbiological contamination of water and indicators of fecal contamination.

Role of fecal contamination in the spread of infections.

Main waterborne pathogens and factors affecting their persistence and transmission in the environment.

Main infections transmitted via the fecal–oral route.

Infections associated with water systems and aerosols.

Exposure to other contaminants and associated health risks: mycotoxins.

Principles of prevention, control, and surveillance of diseases associated with water contamination and water quality.


Air Pollution and Health

Main air pollutants and their sources.

Biological effects of air pollutants and tissue damage.

Indoor air pollution: molds, allergens, and microbiological air quality in confined environments.

Air pollution and its effects on health.

Chronic exposure to air pollutants and cancer risk.

Effects of air pollution on particularly susceptible population groups.

Prevention and reduction of exposure to air pollutants.

Textbook Information

  1. Fanti F., Biologia, microbiologia e tecnologie di controllo ambientale, Zanichelli.
  2. Biavati B., Sorlini C. (a cura di), Microbiologia agroambientale, Casa Editrice Ambrosiana.
  3. AA.VV., Igiene ambientale, EdiSES.
Additional supplementary teaching materials may be prepared by the lecturers and made available on the Studium platform.

Course Planning

 SubjectsText References
1Fundamentals of Microbiology and Microbial Ecology Structure and organization of prokaryotic and eukaryotic cells: bacteria, fungi, algae, and protozoa of environmental interest. Basic concepts of virology. Classification, nutrition, metabolism, and growth of microorganisms of environmental interest. Biological associations and interactions among microorganisms. Microbial biofilms: formation, structure, properties, and environmental relevance. Microbiology of the main environmental compartments: soil, water, and atmosphere; microbiology of extreme environments. Biogeochemical cycles of the elements and the role of microorganisms. Reference texts: 1, 2; supplementary teaching materials available on Studium.Microbiology of Contaminated Environments and Biotechnologies for Bioremediation Microbial adaptation to contaminated environments. Microbial degradation and transformation of organic pollutants. Microbial transformation of inorganic pollutants and interactions with metals. Microbiological principles of in situ and ex situ bioremediation. Biostimulation and bioaugmentation. Mycoremediation and phytoremediation. Microbial biotechnologies for the decontamination of soils, water, and sediments. Reference texts: 1, 2; supplementary teaching materials available on Studium.Microbiological Processes Applied to Environmental Management Microbiology of water and wastewater. Microbiological indicators of water contamination. Microbiological principles of wastewater treatment plants and biological processes for wastewater treatment. Natural wastewater treatment systems and phytoremediation. Solid waste and biological treatment of organic waste. Microbiological principles of composting. Microbial biodeterioration of artistic artifacts and biotechnological applications for the conservation and restoration of cultural heritage. Reference texts: 1, 2; supplementary teaching materials available on Studium.Environment–Health Relationship Relationship between environment, climate, and health. Effects of climate change on the geographical distribution of arthropod vectors and the pathogens they transmit. Influence of temperature, precipitation, humidity, and ecosystem changes on vector survival, reproduction, and vector competence. Latitudinal and altitudinal expansion of vectors and changes in the seasonal duration of transmission. Globalization, human mobility, and the introduction of vectors and pathogens into new geographical areas. Climate change and the risk of emergence or re-emergence of vector-borne diseases in the Mediterranean region. Environmental and epidemiological surveillance of vector-borne diseases. Reference text: 3; supplementary teaching materials available on Studium.Water–Health Relationship Microbiological contamination of water and indicators of fecal contamination. Role of fecal contamination in the spread of infections. Main waterborne pathogens and factors affecting their persistence and transmission in the environment. Main infections transmitted via the fecal–oral route. Infections associated with water systems and aerosols. Exposure to other contaminants and associated health risks: mycotoxins. Principles of prevention, control, and surveillance of diseases associated with water contamination and water quality. Reference texts: 1, 3; supplementary teaching materials available on Studium. Air Pollution and Health Main air pollutants and their sources. Biological effects of air pollutants and tissue damage. Indoor air pollution: molds, allergens, and microbiological air quality in confined environments. Air pollution and its effects on health. Chronic exposure to air pollutants and cancer risk. Effects of air pollution on particularly susceptible population groups. Prevention and reduction of exposure to air pollutants. Reference text: 3; supplementary teaching materials available on Studium.

Learning Assessment

Learning Assessment Procedures

Learning assessment is carried out through a final oral examination aimed at verifying the achievement of the expected learning outcomes and the level of knowledge and understanding of the course content. The oral examination generally consists of approximately five questions covering the different areas of the syllabus and has an average duration of about 15 minutes. The assessment takes into account the accuracy, completeness, and relevance of the answers; the ability to describe and explain the microbiological, environmental, and health-related phenomena addressed during the course; the ability to apply the acquired knowledge to the interpretation of issues concerning contamination, environmental remediation, and the relationships between environment and health; as well as the ability to establish connections among the different topics of the syllabus. The ability to analyse and synthesize information, independent judgement, the ability to critically discuss the relationships between environmental factors and health, the appropriate use of scientific terminology, and clarity of presentation are also assessed. In particular, within the field of environmental microbiology and biotechnology, students may be asked to compare different bioremediation strategies, illustrating their principles, applications, potential, and limitations. Within the field of environment–health relationships, students may be asked to interpret the relationship between climate change and the distribution of vector-borne diseases, between water contamination and infectious risk, and between air pollution and its effects on health.

The final grade is expressed on a 30-point scale and takes into account the overall quality of the knowledge acquired, the ability to apply and integrate such knowledge, critical analysis skills, and the quality of the oral presentation, according to the following criteria:

Exam not passed: insufficient knowledge of the main course contents, poor or absent ability to use the specific terminology of the discipline, and inadequate ability to apply the acquired knowledge.

Grade 18–21: minimal knowledge of the course contents, modest ability to integrate and critically analyse information, and sufficiently clear presentation, with limited command of the specific terminology.

Grade 22–25: satisfactory knowledge of the course contents, adequate ability to integrate and critically analyse information, although not always in a fully coherent manner, and fairly clear presentation with a satisfactory command of the specific terminology.

Grade 26–28: good knowledge of the course contents, good ability to integrate information, critically analyse topics, and establish connections among them, with clear presentation and appropriate use of scientific terminology.

Grade 29–30 with honours: thorough and comprehensive knowledge of the course contents, a high level of integration and critical analysis, autonomy in applying the acquired knowledge, and excellent communication skills and command of scientific terminology.

Exam dates are published on the Degree Programme website: https://www.dsf.unict.it/it/corsi/l-29_sfa/calendario-esami.

Learning assessment may also be carried out online, should circumstances require it.

To ensure equal opportunities and in compliance with current legislation, students may request an individual meeting to discuss and arrange any appropriate compensatory and/or dispensatory measures in relation to the learning objectives and their specific needs. Students may also contact the CInAP (Centro per l’Integrazione Attiva e Partecipata – Services for Students with Disabilities and/or Specific Learning Disorders; https://www.cinap.unict.it/content/referenti) and the Departmental CInAP representative, Prof. Santina Chiechio (santina.chiechio@unict.it).

Examples of frequently asked questions and / or exercises

  1. Describe the process of microbial biofilm formation and discuss its relevance in natural and contaminated environments.

  2. Explain the role of microorganisms in biogeochemical cycles, with particular reference to the nitrogen cycle.

  3. Explain how microorganisms degrade or transform organic pollutants present in the environment.

  4. Compare biostimulation and bioaugmentation, discussing their principles, possible applications, advantages, and limitations in bioremediation.

  5. Explain the principles of biological wastewater treatment and the significance of microbiological indicators of fecal contamination.

  6. Describe the role of microorganisms in composting.

  7. Explain how climate change can alter the geographical and seasonal distribution of arthropod vectors and the risk of transmission of vector-borne diseases.

  8. Explain the relationship between microbiological contamination of water and infectious risk.